Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs8063956 | chr16:4531761 | T/C | 3.38E-6 | 214 | 16.45 | 12.63 | 10.83 | KM Plot |
KIRP | rs8065975 | chr17:80829288 | C/G | 9.46E-5 | 211 | 15.33 | 17.2 | 13.17 | KM Plot |
KIRP | rs8069143 | chr17:77865500 | G/A | 0.000457 | 209 | 16.43 | 14.83 | 0.9 | KM Plot |
KIRP | rs8069402 | chr17:80778509 | C/G | 0.000119 | 207 | 14.83 | 17.6 | 15.15 | KM Plot |
KIRP | rs8078698 | chr17:46108951 | A/C | 3.09E-8 | 206 | 16.5 | 13.03 | 9 | KM Plot |
KIRP | rs8079088 | chr17:80780058 | C/T | 0.000119 | 207 | 14.83 | 17.6 | 15.15 | KM Plot |
KIRP | rs8080989 | chr17:45320688 | A/G | 2.7E-11 | 208 | 14.68 | 28.03 | 0.43 | KM Plot |
KIRP | rs8099738 | chr18:55579183 | C/T | 8.43E-5 | 214 | 17.02 | 10.08 | 12.83 | KM Plot |
KIRP | rs8118494 | chr20:37228659 | G/T | 4.44E-16 | 214 | 15.33 | 22.1 | 6.7 | KM Plot |
KIRP | rs8122834 | chr20:37228424 | G/C | 4.44E-16 | 212 | 6.7 | 24.9 | 15.88 | KM Plot |
KIRP | rs8133082 | chr21:47599913 | G/T | 2.07E-8 | 211 | 16.5 | 14.33 | 1.9 | KM Plot |
KIRP | rs8133482 | chr21:47600192 | G/A | 2.07E-8 | 211 | 16.5 | 14.33 | 1.9 | KM Plot |
KIRP | rs8140044 | chr22:40106982 | A/G | 0 | 214 | 7.43 | 23.13 | 16.43 | KM Plot |
KIRP | rs8140273 | chr22:29865140 | C/G | 0 | 214 | 4.07 | 14.53 | 16.5 | KM Plot |
KIRP | rs836818 | chr5:79947956 | G/A | 0.000105 | 214 | 18.65 | 14.83 | 9.77 | KM Plot |